publications

= equal contribution, c corresponding authors, collaborator profiles , selected papers listed - see Google Scholar for a complete list

2025

  1. arXiv
    2025_zentner/condensates_computers.png
    Information processing driven by multicomponent surface condensates
    Aidan Zentner, Ethan V Halingstad, Cameron Chalk, Michael P Brenner, Arvind Murugan, Erik Winfree, and Krishna Shrinivasc
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  2. PNAS
    2025_snead/paraspeckles_gif.gif
    Immiscible proteins compete for RNA binding to order condensate layers
    Wilton T. Sneadc, Mary K. Skillicorn, Krishna Shrinivasc, and Amy S. Gladfelterc
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2024

  1. bioRxiv
    2025_krueger/idps.gif
    Generalized design of sequence-ensemble-function relationships for intrinsically disordered proteins
    Ryan Krueger, Michael P Brennerc, and Krishna Shrinivasc
    PDF Supp Code Website

2023

  1. Nat. Comm
    2023_schede/rna_cartoon.png
    A model for organization and regulation of nuclear condensates by gene activity
    Halima H. Schede=, Pradeep Natarajan=, Arup K. Chakraborty, and Krishna Shrinivasc
    PDF Supp Code Website

2021

  1. PNAS
    2021_shrinivas/random_phases.jpg
    Phase separation in fluids with many interacting components
    Krishna Shrinivasc, and Michael P Brenner
    PDF Supp Code Website
  2. Cell
    2021_henninger/RNA.png
    RNA-Mediated Feedback Control of Transcriptional Condensates
    Jonathan E. Henninger=, Ozgur Oksuz=, Krishna Shrinivas=, Ido Sagi, Gary LeRoy, Ming M. Zheng, J. Owen Andrews, Alicia V. Zamudio, Charalampos Lazaris, Nancy M. Hannett, Tong Ihn Lee, Phillip A. Sharp, Ibrahim I. Cissé, Arup K. Chakrabortyc, and Richard A. Youngc
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2019

  1. Mol. Cell
    2019_shrinivas/enhancer.png
    Enhancer features that drive formation of transcriptional condensates
    Krishna Shrinivas=, Benjamin R Sabari=, Eliot L Coffey, Isaac A Klein, Ann Boija, Alicia V Zamudio, Jurian Schuijers, Nancy M Hannett, Phillip A. Sharp, Richard A. Youngc, and Arup K. Chakrabortyc
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2018

  1. PNAS
    2018_gao/haeckel.webp
    Evolution of weak cooperative interactions for biological specificity
    Ang Gao=, Krishna Shrinivas=, Paul Lepeudry, Hiroshi I Suzuki, Phillip A Sharpc, and Arup K Chakrabortyc
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  2. Science
    2018_sabari/SE_condensate.jpeg
    Coactivator condensation at super-enhancers links phase separation and gene control
    Benjamin R Sabari, Alessandra Dall’Agnese, Ann Boija, Isaac A Klein, Eliot L Coffey, Krishna Shrinivas, Brian J Abraham, Nancy M Hannett, Alicia V Zamudio, John C Manteiga, and  others
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2017

  1. Cell
    2017_hnisz/cartoon_SE.png
    A phase separation model for transcriptional control
    Denes Hnisz=, Krishna Shrinivas=, Richard A Youngc, Arup K Chakrabortyc, and Phillip A Sharpc
    PDF Supp Code Website