publications

= equal contribution, c corresponding authors, see Google Scholar for an up-to-date and complete list

2025

  1. Immiscible Proteins Compete for RNA Binding to Order Condensate Layers
    Wilton T. Snead, Mary K. Skillicorn, Krishna Shrinivasc, and Amy S. Gladfelterc

2024

  1. Generalized Design of Sequence-Ensemble-Function Relationships for Intrinsically Disordered Proteins
    Ryan Krueger, Michael P Brennerc, and Krishna Shrinivasc
  2. Learning and Inference in a Lattice Model of Multicomponent Condensates
    Cameron Chalk, Salvador Buse, Krishna Shrinivas, Arvind Murugan, and Erik Winfree

2023

  1. A model for organization and regulation of nuclear condensates by gene activity
    Halima H. Schede=, Pradeep Natarajan=Arup K. Chakraborty, and Krishna Shrinivasc
  2. A model for cis-regulation of transcriptional condensates and gene expression by proximal lncRNAs
    Pradeep Natarajan, Krishna Shrinivas, and Arup K Chakraborty
  3. The phosphatidylinositol-transfer protein Nir3 promotes PI (4, 5) P2 replenishment in response to TCR signaling during T cell development and survival
    Wen Lu, Ynes A Helou, Krishna Shrinivas, Jen Liou, Byron B Au-Yeung, and Arthur Weiss

2022

  1. Multiphase coexistence capacity in complex fluids
    Krishna Shrinivasc, and Michael P Brenner

2021

  1. Phase separation in fluids with many interacting components
    Krishna Shrinivasc, and Michael P Brenner
  2. RNA-Mediated Feedback Control of Transcriptional Condensates
    Jonathan E. Henninger=, Ozgur Oksuz=, Krishna Shrinivas=, Ido Sagi, Gary LeRoy, Ming M. Zheng, and 9 more authors

2020

  1. Partitioning of cancer therapeutics in nuclear condensates
    Isaac A Klein, Ann Boija, Lena K Afeyan, Susana Wilson Hawken, Mengyang Fan, Alessandra Dall’Agnese, and 5 more authors

2019

  1. Enhancer features that drive formation of transcriptional condensates
    Krishna Shrinivas=Benjamin R Sabari=, Eliot L Coffey, Isaac A Klein, Ann Boija, Alicia V Zamudio, and 5 more authors
  2. Pol II phosphorylation regulates a switch between transcriptional and splicing condensates
    Yang Eric Guo, John C Manteiga, Jonathan E Henninger, Benjamin R Sabari, Alessandra Dall’Agnese, Nancy M Hannett, and 5 more authors

2018

  1. Evolution of weak cooperative interactions for biological specificity
    Ang Gao=, Krishna Shrinivas=, Paul Lepeudry, Hiroshi I Suzuki, Phillip A Sharp, and Arup K Chakraborty
  2. Transcription factors activate genes through the phase-separation capacity of their activation domains
    Ann Boija, Isaac A Klein, Benjamin R Sabari, Alessandra Dall’Agnese, Eliot L Coffey, Alicia V Zamudio, and 5 more authors
  3. Coactivator condensation at super-enhancers links phase separation and gene control
    Benjamin R Sabari, Alessandra Dall’Agnese, Ann Boija, Isaac A Klein, Eliot L Coffey, Krishna Shrinivas, and 5 more authors

2017

  1. A phase separation model for transcriptional control