genome regulation and nuclear organization by condensates + RNA

References

2025

  1. Immiscible Proteins Compete for RNA Binding to Order Condensate Layers
    Wilton T. Snead, Mary K. Skillicorn, Krishna Shrinivasc, and Amy S. Gladfelterc

2023

  1. A model for organization and regulation of nuclear condensates by gene activity
    Halima H. Schede=, Pradeep Natarajan=Arup K. Chakraborty, and Krishna Shrinivasc
  2. A model for cis-regulation of transcriptional condensates and gene expression by proximal lncRNAs
    Pradeep Natarajan, Krishna Shrinivas, and Arup K Chakraborty

2021

  1. RNA-Mediated Feedback Control of Transcriptional Condensates
    Jonathan E. Henninger=, Ozgur Oksuz=, Krishna Shrinivas=, Ido Sagi, Gary LeRoy, Ming M. Zheng, and 9 more authors

2020

  1. Partitioning of cancer therapeutics in nuclear condensates
    Isaac A Klein, Ann Boija, Lena K Afeyan, Susana Wilson Hawken, Mengyang Fan, Alessandra Dall’Agnese, and 5 more authors

2019

  1. Enhancer features that drive formation of transcriptional condensates
    Krishna Shrinivas=Benjamin R Sabari=, Eliot L Coffey, Isaac A Klein, Ann Boija, Alicia V Zamudio, and 5 more authors
  2. Pol II phosphorylation regulates a switch between transcriptional and splicing condensates
    Yang Eric Guo, John C Manteiga, Jonathan E Henninger, Benjamin R Sabari, Alessandra Dall’Agnese, Nancy M Hannett, and 5 more authors

2018

  1. Transcription factors activate genes through the phase-separation capacity of their activation domains
    Ann Boija, Isaac A Klein, Benjamin R Sabari, Alessandra Dall’Agnese, Eliot L Coffey, Alicia V Zamudio, and 5 more authors
  2. Coactivator condensation at super-enhancers links phase separation and gene control
    Benjamin R Sabari, Alessandra Dall’Agnese, Ann Boija, Isaac A Klein, Eliot L Coffey, Krishna Shrinivas, and 5 more authors

2017

  1. A phase separation model for transcriptional control